In order to diagnose encephalitis, the symptoms and medical history are first taken in a medical consultation (anamnesis). Details such as previous general illnesses, viral infections or tick bites are particularly important. Also holiday trips in the recent past as well as contact with farm animals or other persons with encephalitis are important. If necessary, additional attempts are made to obtain a second description from a relative or friend of the patient, as persons with encephalitis are often limited in their thinking, perception, and ability to communicate.
A detailed physical (bodily) and neurological examination is then performed. Here, in addition to the symptoms described, skin symptoms or disturbances of the water balance are sometimes detected.
If encephalitis is suspected, a sample of cerebrospinal fluid (CSF) is taken by lumbar puncture and examined in the laboratory for the presence of pathogens or signs of inflammation. The exact nature of the pathogen can be determined with the aid of a polymerase chain reaction (PCR), as even the smallest amounts of virus particles are sufficient to determine the cause of the disease. However, since the pathogens of encephalitis are often only detectable after a longer period of time and the cerebrospinal fluid is still free of pathogens in the acute phase of the brain inflammation, the diagnosis "encephalitis" is made in many cases on the basis of the characteristic symptoms. Only at a later stage is the diagnosis confirmed by laboratory diagnostics.
Normally, if encephalitis is suspected, a computer tomography (CT) scan is also performed to rule out other brain diseases such as cerebral haemorrhage. Magnetic resonance imaging (MRI) may also be used. In order to better visualize the consequences of the inflammation on brain function already in the early stages of the disease, electroencephalography (EEG) is often performed.